Volume 14 Supplement 2

Selected articles from the Eleventh Asia Pacific Bioinformatics Conference (APBC 2013): Bioinformatics

Open Access

Erratum to: CoNVEX: copy number variation estimation in exome sequencing data using HMM

  • Kaushalya C Amarasinghe1Email author,
  • Jason Li2 and
  • Saman K Halgamuge1
BMC Bioinformatics201314(Suppl 2):S26

DOI: 10.1186/1471-2105-14-S2-S26

Published: 3 June 2013

The original article was published in BMC Bioinformatics 2013 14:S2

Our proposed method, to detect copy number variations in whole exome sequencing data [1] was published in BMC Bioinformatics as a special issue containing the proceedings of The Eleventh Asia Pacific Bioinformatics Conference (APBC 2013). After the publication, it was brought to our attention that name of our software has a conflict with another software developed by a project carried out at Wellcome Trust Sanger Institute (http://www.uk10k.org/assets/ashg_vijayarangakannan_etal_2012.pdf). We were not aware of this project when we first named our method as "CoNVEX", in mid 2012. Therefore, we would like to thank Dr. P. Vijayarangakannan, one of the developers of the other method, for bringing this to our attention. We would like to mention that, although both software share the same name, they are different in terms of computational methods and types of exome sequencing data used.

To avoid any confusion associated with the software name, we would no longer call our software as "CoNVEX". Our software will be further developed with a new project name, "Aberration Detection in Tumour Exome (ADTEx)".

Notes

Declarations

Acknowledgements

This article has been published as part of BMC Bioinformatics Volume 14 Supplement 2, 2013: Selected articles from the Eleventh Asia Pacific Bioinformatics Conference (APBC 2013): Bioinformatics. The full contents of the supplement are available online at http://www.biomedcentral.com/bmcbioinformatics/supplements/14/S2.

Authors’ Affiliations

(1)
Department of Mechanical Engineering, University of Melbourne
(2)
Bioinformatics Core Facility, Peter MacCallum Cancer Centre

References

  1. Amarasinghe K, Li J, Halgamuge S: CoNVEX: copy number variation estimation in exome sequencing data using HMM. BMC Bioinformatics. 2013, 14 (Suppl 2): S2-10.1186/1471-2105-14-S2-S2.PubMed CentralView ArticlePubMedGoogle Scholar

Copyright

© Amarasinghe et al.; licensee BioMed Central Ltd. 2013

This article is published under license to BioMed Central Ltd. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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