Volume 16 Supplement 16

BioNLP Shared Task 2013: Part 2

Research

Edited by Claire Nédellec, Sampo Pyysalo, Sophia Ananiadou and Pierre Zweigenbaum

Publication of this supplement has not been supported by sponsorship. Information about the source of funding for publication charges can be found in the individual articles. Articles have undergone the journal's standard peer review process for supplements. The Supplement Editors declare that they have no competing interests.

BioNLP Shared Task 2013. Go to conference site.

Sofia, Bulgaria

9 August 2013

  1. Research

    Optimizing graph-based patterns to extract biomedical events from the literature

    We participated in the BioNLP 2013 shared tasks on event extraction. Our extraction method is based on the search for an approximate subgraph isomorphism between key context dependencies of events and graphs o...

    Haibin Liu, Karin Verspoor, Donald C Comeau, Andrew D MacKinlay and W John Wilbur

    BMC Bioinformatics 2015 16(Suppl 16):S2

    Published on: 30 October 2015

  2. Research

    Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis

    Modern methods for mining biomolecular interactions from literature typically make predictions based solely on the immediate textual context, in effect a single sentence. No prior work has been published on ex...

    Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer and Filip Ginter

    BMC Bioinformatics 2015 16(Suppl 16):S3

    Published on: 30 October 2015

  3. Research

    TEES 2.2: Biomedical Event Extraction for Diverse Corpora

    The Turku Event Extraction System (TEES) is a text mining program developed for the extraction of events, complex biomedical relationships, from scientific literature. Based on a graph-generation approach, the...

    Jari Björne and Tapio Salakoski

    BMC Bioinformatics 2015 16(Suppl 16):S4

    Published on: 30 October 2015