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Table 5 Liver cancer datasets: MTGDR estimates and rank (in meta analysis of marginal effects)

From: Regularized gene selection in cancer microarray meta-analysis

Gene Information

D1

D2

D3

D4

Rank

1.2.F.7/noseq/

-0.076

-0.100

-0.078

-0.035

340

1.3.A.8/clone MGC:5207 IMAGE:2901089

0.147

0.199

0.030

0.054

151

10.1.B.9/cDNA FLJ20844 fis, clone ADKA01904

-0.020

-0.016

-0.002

-0.002

556

11.3.F.6/noseq/

-0.275

-0.519

-0.225

-0.170

259

15.1.G.7/Cyt19 protein (Cyt19), mRNA

0.023

0.019

-0.001

0.009

144

15.2.D.10/EST387826 cDNA

-0.041

-0.031

-0.003

-0.015

17

15.3.E.9/hypothetical protein MGC11287

0.016

0.034

0.015

0.014

131

15.4.E.1/Rab9 effector p40 (RAB9P40), mRNA

0.166

0.243

-0.012

0.083

315

17.2.B.11/ATPase, H+ transporting, lysosomal 9 kD

0.145

0.258

0.108

0.020

110

18.3.F.6/nomatch/

0.072

0.073

0.070

0.045

501

19.1.G.5/Ras association (RalGDS/

0.168

0.176

-0.036

0.042

472

2.2.E.11/triosephosphate isomerase 1 (TPI1), mRNA

0.012

0.012

0.004

0.011

59

2.2.G.10/UDP-glucose pyrophosphorylase 2 (UGP2)

-0.296

-0.274

-0.043

-0.178

126

21.3.A.4/noseq/

0.016

0.011

0.002

0.001

723

23.3.H.1/thioredoxin-like, 32 kD (TXNL)

0.285

0.226

0.066

0.033

252

25.2.A.5/noseq/

0.016

0.014

0.001

0.009

974

26.2.D.2/adipose differentiation-related protein (ADFP)

-0.169

-0.114

-0.219

-0.118

12

26.4.B.5/Human zyxin related protein ZRP-1 mRNA

0.161

0.127

0.042

0.070

118

3.2.E.10/Human G protein-coupled receptor V28 mRNA

-0.707

-0.589

-0.359

-0.375

88

4.1.D.1/multiple endocrine neoplasia I (MEN1), mRNA

-0.086

-0.075

-0.130

-0.090

22

4.2.H.5/solute carrier family 22, member 1

-0.014

-0.120

-0.144

-0.092

38

4.3.C.1/noseq/

-0.058

-0.020

-0.008

0.007

123

4.4.B.9/noseq/

-0.438

-0.670

-0.460

-0.502

3

5.1.A.9/noseq/

-0.001

-0.007

-0.002

-0.001

136

5.1.D.1/malate dehydrogenase 2, NAD (mitochondrial)

0.135

0.043

0.063

0.060

214

6.2.E.3/tubulin, beta polypeptide (TUBB), mRNA/

0.024

0.012

0.004

0.011

33

6.3.B.3/noseq/

0.104

0.104

-0.023

0.015

46

6.4.D.11/non-metastatic cells 2, protein expressed NME2

0.053

0.072

0.020

0.025

61

6.4.F.5/H2A histone family, member Z (H2AFZ), mRNA

0.047

0.062

-0.001

0.042

429

7.3.A.5/nomatch/

-0.329

-0.432

-0.297

-0.222

36

7.3.G.9/guanine nucleotide binding protein, q polypeptide

0.073

0.019

0.049

0.029

153

8.2.B.11/cystatin B (stefin B) (CSTB), mRNA

0.040

0.112

0.051

0.046

884

8.2.D.8/RNA helicase-related protein (RNAHP), mRNA

-0.739

-1.369

-1.002

-1.140

1

8.3.A.7/proline-rich Gla polypeptide 2

-0.001

-0.019

-0.024

-0.026

37