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Figure 5 | BMC Bioinformatics

Figure 5

From: Accessibility and partner number of protein residues, their relationship and a webserver, ContPlot for their display

Figure 5

A display from ContPlot for the 89 residue long inhibitor (barstar) in complexation with the enzyme barnase (PDB file, 1brs) [34] showing the relative accessibilities of the residues. The values that are above (or below) the average value (by one standard deviation) for the same residue type have their symbols and the residue codes colored red (or blue); others (within ± 1σ) are in green. When two plots are overlaid (as in here) with the calculations done once for the chain in the isolated state and then in presence of another subunit in the complex, the coloring of the residue labels corresponds to the results from the latter calculations. Helices and β-strands are shown as red cylinders and blue arrows, respectively.

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