Skip to main content

Table 2 Partner number (median, PNM and average, <PN>), observed (<ASA>obs) and calculated (<ASA>calc) (corresponding to <PN>) ASAs for different amino acid residues

From: Accessibility and partner number of protein residues, their relationship and a webserver, ContPlot for their display

Residue Whole Residue Side Chain
  PNM <PN> <ASA>obs <ASA>calc PNM <PN> <ASA>obs <ASA>calc
Gly 7.5 7.4 (2.2) 26.6 (24.5) 25.9     
Ala 8.0 8.6 (2.5) 28.1 (30.9) 23.9 4.0 3.6 (1.9) 18.2 (21.2) 13.9
Ser 8.0 7.9 (2.6) 39.2 (33.2) 34.7 5.0 3.6 (2.0) 27.9 (24.2) 23.6
Cys 9.5 10.0 (2.3) 17.1 (21.0) 15.1 5.0 5.6 (1.7) 10.3 (15.7) 8.0
Thr 8.5 8.5 (2.6) 44.2 (36.0) 39.9 6.0 4.5 (2.2) 35.5 (30.0) 31.1
Asp 9.5 7.9 (2.5) 58.1 (37.2) 54.3 5.5 3.9 (2.1) 48.0 (30.6) 43.9
Pro 8.5 7.7 (2.6) 54.2 (39.5) 51.4 6.0 4.9 (2.4) 43.4 (32.8) 40.5
Asn 9.0 8.3 (2.7) 57.9 (40.8) 53.7 6.5 4.4 (2.3) 48.0 (33.7) 42.9
Val 9.5 10.3 (2.6) 24.1 (32.0) 20.3 5.5 6.0 (2.1) 19.0 (27.2) 13.5
Glu 9.5 8.4 (2.5) 73.4 (41.9) 70.7 5.5 4.0 (2.2) 63.8 (36.3) 59.9
Gln 9.0 9.0 (2.7) 68.6 (43.3) 62.1 6.5 4.6 (2.4) 59.6 (37.7) 54.6
His 9.5 9.7 (2.9) 53.8 (44.6) 48.2 6.0 5.7 (2.5) 46.5 (38.7) 40.1
Leu 9.5 11.0 (2.7) 28.8 (38.0) 21.9 6.5 6.6 (2.3) 23.3 (32.6) 16.9
Ile 8.5 11.0 (2.7) 25.0 (35.2) 18.9 6.5 6.9 (2.2) 20.5 (30.6) 15.2
Met 9.5 11.2 (3.1) 35.5 (45.8) 26.5 6.5 6.7 (2.6) 28.9 (38.1) 21.1
Lys 9.5 8.4 (2.4) 95.8 (42.9) 92.5 6.5 4.0 (2.1) 85.4 (37.0) 82.3
Phe 10.0 11.9 (2.9) 31.0 (39.8) 24.5 7.0 7.9 (2.5) 25.3 (35.1) 18.5
Tyr 10.0 11.5 (3.1) 45.5 (45.0) 38.2 7.5 7.5 (2.6) 39.7 (40.2) 33.8
Arg 11.0 10.1 (3.1) 85.5 (53.3) 80.0 8.0 5.8 (2.7) 77.3 (48.0) 70.4
Trp 11.0 12.6 (3.2) 43.5 (47.6) 36.9 8.0 8.8 (2.9) 37.8 (43.7) 29.3
  1. The standard deviations are in parentheses. <ASA>calc at a given <PN> is obtained using the equation provided in Table 1.