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Table 1 10 K breakpoint recovery results

From: Most parsimonious haplotype allele sharing determination

  i Linker xPedPhase Block-Extension
Pedigree Precision Recall Precision Recall Precision Recall
2-2 0.994 0.936 0.971 0.952 0.253 1.000
2–3 0.982 0.965 0.964 0.966 0.326 0.999
2-3-1 0.985 0.965 0.961 0.972 0.214 0.999
2-3-2 0.989 0.962 0.955 0.972 0.151 0.995
2-3-3 0.972 0.968 0.935 0.976 0.177 0.996
2-3-5 0.977 0.971 0.872 0.989 0.160 0.997
2-4-3 0.984 0.969 0.924 0.978 0.203 0.999
2-5-4 0.989 0.949 0.882 0.976 0.231 0.999
2-5-5 0.991 0.970 0.846 0.989 0.204 0.998
2-6-5 0.986 0.956 0.867 0.984 0.212 0.999
Average 0.984 0.964 0.912 0.978 0.213 0.998
  1. Breakpoint recovery results: Average breakpoint recovery precision and recall by i Linker, xPedPhase, and Block-Extension on 10 K genotype datasets.