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Table 1 Unique CpGs and CGIs defined by the HEP data

From: Profile analysis and prediction of tissue-specific CpG island methylation classes

Tissue/Cell type Abbreviation Total # CpGs (%)* # CGIs (%)**
CD4 T lymphocytes CD4 31,219 (94.86) 515 (99.61)
CD8 T lymphocytes CD8 29,979 (91.09) 503 (97.29)
Dermal fibroblasts DF 29,776 (90.48) 504 (97.49)
Dermal keratinocytes DK 29,739 (90.36) 508 (98.26)
Dermal melanocytes DM 29,809 (90.58) 504 (97.49)
Fetal liver FL 24,343 (73.97) 452 (87.43)
Fetal skeletal muscle FSM 24,250 (73.69) 448 (86.65)
Heart muscle HM 31,268 (95.01) 517 (100)
Liver - 31,456 (95.58) 517 (100)
Placenta - 29,900 (90.85) 505 (97.68)
Skeletal muscle SM 31,518 (95.77) 513 (99.23)
Sperm - 23,621 (71.77) 444 (85.88)
Supported by at least 2 tissues:   32,910 517
  1. * Number and percentage of CpGs measured in at least one of the twelve tissues.
  2. ** Number and percentage of CGIs where at least 70% of the CpGs were covered by the HEP data, in at least two tissues.