Table 7 Coincidence between gene association classes and PBCs
From: Profile analysis and prediction of tissue-specific CpG island methylation classes
Gene association class | Constitutively unmethylated (PI) | Constitutively methylated (PI) | Unmethylated in sperm (PI) | Differentially methylated (PI) |
|---|---|---|---|---|
TSS | 138 (5.27E-13) | 3 | 3 | 2 |
Promoter | 118 | 28 | 17 | 15 |
3'UTR | 1 | 6 (1.2E-03) | 1 | 4 |
CDS | 14 | 23 (9.29E-08) | 7 | 7 |
Intron | 12 | 8 | 0 | 9 (7.3E-05) |
Pseudogene | 33 | 11 | 14 (7.6E-05) | 4 |
NA | 7 | 5 | 2 | 3 |
Sum (% of total) | 323 (65.25) | 84 (16.97) | 44 (8.89) | 44 (8.89) |