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Figure 2 | BMC Bioinformatics

Figure 2

From: Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins

Figure 2

Sequence logos and radial cumulative propensity plots (RCP-plots). Sequence logos and radial cumulative propensity plots (RCP-plots) illustrating enrichment as well as depletion of particular amino acid types in the local sequence (sequence logo), sequence-local spatial environment including the 6 flanking amino acid residues on either side of the central serine/threonine/tyrosine, (left RCP-plot), spatially-local, but non-sequence local; i.e., excluding residues in the flanking sequence (middle plot), and combined information (right-most RCP-plot). For every amino acid type, the two different sub-sectors correspond to the statistics obtained by using the closest detected atom and the interaction center, respectively, and in clockwise order.

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BMC Bioinformatics

ISSN: 1471-2105

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