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Table 2 Selected interactions for Parkinson study.

From: MegaSNPHunter: a learning approach to detect disease predisposition SNPs and high level interactions in genome wide association study

Interacted SNPs

Genotype association χ2P value

Permutation test P value

rs2235617 ⇔ rs2470378

2.318 * 10-7

3.0 * 10-6

rs7172832 ⇔ rs906428

4.219 * 10-7

2.89 * 10-4

rs1505376 ⇔ rs3861561

4.998 * 10-7

1.62 * 10-4

rs13032261 ⇔ rs7924316

2.824 * 10-6

2.72 * 10-4

rs13032261 ⇔ rs2284967

6.325 * 10-6

3.39 * 10-4

rs13032261 ⇔ rs906428

6.402 * 10-6

3.44 * 10-4

rs842796 ⇔ rs800897

6.596 * 10-6

3.36 * 10-4

  1. This table reports the selected interactions and their genotype association χ2P values.
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BMC Bioinformatics

ISSN: 1471-2105

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