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Table 4 Selected interactions for WTCCC study.

From: MegaSNPHunter: a learning approach to detect disease predisposition SNPs and high level interactions in genome wide association study

Interacted SNPs Genotype association χ2P value Permutation test P value
rs4418931 rs4523817 6.83 * 10-15 0.001382
rs6696928 rs10493711 2.075 * 10-12 0.00216
rs262714 rs407818 6.532 * 10-8 0.00240
rs2041377 rs11113207 6.95 * 10-8 0.00236
rs7459039 rs10271302 1.073 * 10-8 0.003224
rs17565060 rs7220740 3.406 * 10-7 0.00345
rs9268230 rs7751204 6.90 * 10-7 0.0112
rs17507967 rs12126069 8.622 * 10-7 0.00384
rs3738369 rs11206109 1.53 * 10-6 0.00389
  1. This table reports the selected interactions and their genotype association χ2P values.