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Table 4 Selected interactions for WTCCC study.

From: MegaSNPHunter: a learning approach to detect disease predisposition SNPs and high level interactions in genome wide association study

Interacted SNPs

Genotype association χ2P value

Permutation test P value

rs4418931 ⇔ rs4523817

6.83 * 10-15

0.001382

rs6696928 ⇔ rs10493711

2.075 * 10-12

0.00216

rs262714 ⇔ rs407818

6.532 * 10-8

0.00240

rs2041377 ⇔ rs11113207

6.95 * 10-8

0.00236

rs7459039 ⇔ rs10271302

1.073 * 10-8

0.003224

rs17565060 ⇔ rs7220740

3.406 * 10-7

0.00345

rs9268230 ⇔ rs7751204

6.90 * 10-7

0.0112

rs17507967 ⇔ rs12126069

8.622 * 10-7

0.00384

rs3738369 ⇔ rs11206109

1.53 * 10-6

0.00389

  1. This table reports the selected interactions and their genotype association χ2P values.