From: How to find simple and accurate rules for viral protease cleavage specificities
HCV NS3 peptide set | |
---|---|
HCVA | P3 ∉ {K} |
P1 ∈ {C} | |
P1' ∉ {P} | |
HCVB | P6 ∈ {A,N,D,C,E,I,K,M,F,P} |
P5 ∉ {I} | |
P4 ∉ {N,D,Q,G,L,F,P,S,V} | |
P3 ∈ {R,E,G,I,L,T,V} | |
P1 ∉ {R,P,Y} | |
P1' ∈ {A,R,N,D,H,M,S,W,Y} | |
P3' ∉ {Q,E,I,L,M,P,V} | |
HCVC | P4 ∉ {S} |
P3 ∈ {R,E,G,I,F,T,V} | |
P2 ∉ {C,L,S,T} | |
P1 ∉ {R,D,P,Y} | |
P1' ∉ {C,Q,E,G,I,L,K,P,T,V} | |
P2' ∉ {P} | |
P3' ∉ {P} | |
P4' ∉ {A,R,D,E,G,I,P,S,T} | |
HCVD | P6 ∈ {C} |
P4 ∈ {R,C,E,I,M,T,V} | |
P4' ∈ {C,W,Y,V} |