|
Fold
|
SCOP sid
|
P
|
S
|
T
|
Q
|
R
|
P/R
|
S/R
|
T/R
|
Q/R
|
|---|
|
β-grasp
|
d1ubia_
|
33
|
9
|
42
|
14
|
15
|
15/15
|
9/15
|
13/15
|
10/15
|
|
Key-barrel
|
d1tttb1
|
10
|
3
|
0
|
17
|
5
|
5/5
|
1/5
|
0/5
|
4/5
|
|
Immunoglobulin
|
d1ae6h1
|
27
|
1
|
4
|
1
|
11
|
9/11
|
1/11
|
4/11
|
1/11
|
|
Plait (ferredoxin)
|
d1bhne_
|
20
|
1
|
61
|
14
|
28
|
7/28
|
1/28
|
24/28
|
6/28
|
|
GFP-like
|
d1h6rb_
|
1
|
1
|
58
|
21
|
1
|
1/1
|
1/1
|
1/1
|
1/1
|
|
Jelly-roll
|
d2phlb1
|
1
|
1
|
19
|
15
|
12
|
1/12
|
1/12
|
10/12
|
5/12
|
|
TIM-barrel
|
d1tima_
|
16
|
16
|
40
|
33
|
32
|
16/32
|
16/32
|
28/32
|
32/32
|
|
NAD-binding fold
|
d1f6dc_
|
1
|
1
|
42
|
19
|
8
|
1/8
|
1/8
|
7/8
|
5/8
|
- The number of superfamilies in the ASTRAL SCOP 95% sequence identity nonredundant database found for the eight query structures by ProSMoS (P), SSM (S), TOPS (T) and our method, QP tableau search (Q). ProSMoS and SSM return a list of significant hits, so the number of superfamilies found by these hits is shown. Other methods return scores for all database structures, and the number of superfamilies in the hits with a Z-score ≥ 3.0 are shown. The R column is the number of superfamilies, from the combined list of those found by all methods, in which the relevant query pattern or fold description is explicitly mentioned in the SCOP structure description. The ratio columns show the number of superfamilies in the R column found by the specified method.
