From: Analyzing miRNA co-expression networks to explore TF-miRNA regulation
Input: An FCG = (V, , Ω), a lower density threshold = δ lower and a density decay constant ξ. |
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Output: A set of k number of PM s {}. |
Formal steps: |
1: Set t ← 0 |
2: Set δ t ← 1 |
3: while δ t ≥ δ lower do |
4: Find the largest PM, , from with respect to the association density δ t |
5: if ≠ ɸ then |
6: V ← V - |
7: |
8: end if |
9: t ← t + 1 |
10: δ t ← δ t (1 - ξ) |
11: end while |
12: k ← t |