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Figure 3 | BMC Bioinformatics

Figure 3

From: Seeking unique and common biological themes in multiple gene lists or datasets: pathway pattern extraction pipeline for pathway-level comparative analysis

Figure 3

The interface for pathway pattern extraction of the PPEP. User can browse to the data sources (e.g., a matrix of enrichment scores) in multiple file formats (text file, Microsoft Excel file and Access file), select Inclusion samples and Exclusion samples from sample list, set criteria for both Inclusion and Exclusion samples. There are also Extract Options for both Inclusion and Exclusion samples so that a term with a portion of samples meets the criteria can be selected.

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BMC Bioinformatics

ISSN: 1471-2105

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