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Table 2 unknown NLS set

From: NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction

ORF

Gene name

Start

Stop

Necessity or Sufficiency (PMID)

YAL040C

CLN3

559

580

11509671

YBL105C

PKC1

810

813

15643058

YBR098W

MMS4

244

263

14642571

YCL017C

NFS1

312

316

11110795

YCL067C

HMLALPHA2

1

13

1976249

YCL067C

HMLALPHA2

141

159

1976249

YCR039C

MATALPHA2

2

13

8757785

YCR039C

MATALPHA2

141

159

8757785

YDR034C

LYS14

190

250

10975256

YEL032W

MCM3

766

772

16093348

YEL061C

CIN8

994

1000

11694576

YGL103W

RPL28

24

30

2104804

YGL103W

RPL28

7

14

2104804

YGR027C

RPS25A

11

36

10386617

YGR027C

RPS25A

87

95

10386617

YIR006C

PAN1

1024

1040

17967424

YIR006C

PAN1

1145

1161

17967424

YJL157C

FAR1

11

30

10485850

YJL157C

FAR1

38

48

10485850

YJL187C

SWE1

304

310

18562688

YJL190C

RPS22A

21

29

10386617

YKL112W

ABF1

624

628

15522095

YLR079W

SIC1

77

89

16294029

YML024W

RPS17A

2

7

3939318

YMR036C

MIH1

31

33

18562688

YOR063W

RPL3

1

21

3931077

YOR274W

MOD5

408

424

9872948

YPR189W

SKI3

306

314

2660461

  1. Characterized yeast nuclear localization signals used in our analysis, for which we could not find evidence for a specific import pathway. Numbers in the last column are pubmed IDs for references. See text for details of how NLSs were classified.