Table 11 Experimental results using six existing TIS predictors on our transcript collections
From: Representative transcript sets for evaluating a translational initiation sites predictor
Data Set | Approach | Sn | Sp | AA | OA |
|---|---|---|---|---|---|
H. sap. | NetStart | 83.59% | 69.35% | 76.47% | 70.00% |
| Â | TISHunter | 94.99% | 99.79% | 97.39% | 99.57% |
| Â | CUB | 80.14% | 99.04% | 89.54% | 98.17% |
| Â | StartScan | 96.72% | 61.29% | 79.01% | 62.92% |
| Â | GENSCAN | 79.02% | 99.11% | 89.07% | 98.19% |
| Â | GlimmerHMM | 68.29% | 98.39% | 83.34% | 96.94% |
M. mus. | NetStart | 83.43% | 68.00% | 75.71% | 68.70% |
| Â | TISHunter | 70.42% | 98.76% | 84.59% | 97.48% |
| Â | CUB | 79.11% | 99.01% | 89.06% | 98.11% |
| Â | GENSCAN | 84.07% | 99.35% | 91.71% | 98.66% |
C. ele. | CUB | 81.30% | 99.28% | 90.29% | 98.62% |
D. mel. | CUB | 83.65% | 99.19% | 91.42% | 98.45% |
C. ele. II | CUB | 79.99% | 99.19% | 89.59% | 98.45% |