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Table 8 Statistics of hydrophobic residues within the context of hydropathy plots

From: Representative transcript sets for evaluating a translational initiation sites predictor

   [0, 20) [20, 40) [40, 60) [60, 80) [80, 100]
   PR LR PR LR PR LR PR LR PR LR
H. sap. I 7% 0% 54% 0% 33% 0% 6% 0% 0% 0%
  II 2% 91% 56% 67% 41% 61% 1% 94% 0% 0%
  III 3% 95% 53% 90% 43% 87% 2% 96% 0% 0%
M. mus. I 6% 0% 50% 0% 33% 0% 10% 0% 0% 0%
  II 2% 89% 51% 67% 42% 59% 5% 84% 0% 0%
  III 3% 94% 52% 87% 41% 85% 4% 95% 0% 0%
C. ele. I 7% 0% 50% 0% 33% 0% 10% 0% 0% 0%
  II 2% 90% 55% 63% 40% 59% 2% 93% 0% 0%
  III 3% 97% 56% 93% 36% 93% 3% 98% 0% 0%
D. mel. I 7% 0% 56% 0% 32% 0% 4% 0% 0% 0%
  II 2% 91% 56% 70% 40% 63% 1% 92% 0% 0%
  III 3% 96% 60% 91% 37% 90% 1% 97% 0% 0%
  1. Given one continuous plot, the percentage is calculated by dividing the number of nucleotide residues that correspond to a positive (0 included) hydropathy index by that in a complete ORF.
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