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Figure 1 | BMC Bioinformatics

Figure 1

From: OHMM: a Hidden Markov Model accurately predicting the occupancy of a transcription factor with a self-overlapping binding motif

Figure 1

Overlapping κB sites. A. Sequence logo of the κB site, based upon the initial motif profile used in HMM training, where the overall height of the nucleotide stack at each position is proportional to the information content at that position and the height of each nucleotide within the stack is proportional to its frequency. B. Four overlapping κB sites are present on the two strands in three adjacent 10-base pair sequence windows.

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