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Table 3 The experimental results for nuclear families when the genotype data of only one parent is available and this parent is diseased.

From: Linked region detection using high-density SNP genotype data via the minimum recombinant model of pedigree haplotype inference

  2 children 3 children 4 children 5 children 6 children
No. of Breakpoints 3.68 (3.75) 7.47 (14.59) 10.32 (25.47) 12.90 (34.83) 15.48 (50.38)
precision 0.33 (0.39) 0.78 (0.26) 0.89 (0.23) 0.94 (0.24) 0.96 (0.21)
recall 0.23 (0.27) 0.72 (0.48) 0.86 (0.55) 0.91 (0.63) 0.92 (0.66)
length of real linked region (cM) 83.14 57.98 45.62 35.15 31.01
length of found linked region (cM) 111.1 (91.45) 65.08 (66.32) 48.85 (49.38) 37.40 (38.02) 32.57 (32.80)
overlap/real 1.00 (1.00) 1.00 (1.00) 1.00 (1.00) 1.00 (1.00) 1.00 (1.00)
overlap/found 0.86 (0.94) 0.93 (0.94) 0.94 (0.93) 0.93 (0.92) 0.93 (0.92)
linked region recovery 1.00
(255/285)
1.00
(229/285)
1.00
(267/285)
1.00
(276/285)
1.00
(281/285)
  1. The meaning of each line is the same as in Table 2.