Skip to main content

Table 2 The performance of hybrid module, which combines HMM and SVM model (using NT25+R).

From: Prediction of nuclear proteins using SVM and HMM models

SVM Threshold

Sensitivity

Specificity

Accuracy

MCC

-1.0

99.19

88.03

90.95

0.80

-0.9

99.04

88.86

91.53

0.82

-0.8

98.86

89.61

92.03

0.82

-0.7

98.63

90.37

92.53

0.83

-0.6

98.34

91.08

92.98

0.84

-0.5

97.82

91.67

93.28

0.85

-0.4

97.49

92.39

93.72

0.85

-0.3

96.86

92.96

93.98

0.86

-0.2

96.13

93.41

94.12

0.86

-0.1

95.46

94.05

94.42

0.86

0.0

94.80

94.55

94.61

0.87

0.1

94.02

95.00

94.75

0.87

0.2

92.80

95.22

94.59

0.86

0.3

92.07

95.77

94.80

0.87

0.4

90.70

96.18

94.75

0.87

0.5

89.52

96.62

94.77

0.87

0.6

87.90

96.91

94.55

0.86

0.7

86.27

97.25

94.38

0.85

0.8

85.21

97.57

94.34

0.85

0.9

83.58

97.70

94.01

0.84

1.0

82.66

98.00

93.99

0.84

  1. Threshold is for cut-off for SVM on the basis of which performance is calculated. Values in bold shows the region where sensitivity and specificity are approximately equal.