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Table 3 Inferred true log odds ratios for target genes of Ste12 in the Rich Medium and Mating Inducing conditions.

From: Effect of false positive and false negative rates on inference of binding target conservation across different conditions and species from ChIP-chip data

 

FNR

  

0.20

0.25

0.30

0.35

0.40

FPR

0.001

5.60

5.98

6.50

7.28

8.44

 

0.002

7.24

7.55

8.54

10.11

12.18

 

0.003

12.93

14.63

16.98

19.78

22.88

 

0.004

25.68

29.10

32.83

36.74

40.73

 

0.005

45.21

50.03

54.92

59.77

64.51

  1. Inferred true log odds ratio values for different values of false positive rate and false negative rate for the binding targets of Ste12 in the Rich Medium and Mating Inducing conditions. The Observed log odds ratio is obtained from cross-tabulation of the binding targets in the two conditions, and is equal to 4.56.
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BMC Bioinformatics

ISSN: 1471-2105

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