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Table 2 Comparison of BSMAP and other mapping algorithms
From:
BSMAP: whole genome bisulfite sequence MAPping program
Speed reads/sec/CPU core)
Uniquely Aligned Reads (%)
BSMAP
146
44.9%
Cokus Alignment [
4
]
~25 [
4
]
45.1%
Meissner mapping [
2
]
83*
39.1%
Lister mapping [
3
]
125*
42.5%
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