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Table 1 Top significant GO groups identified between BCR/ABL and NEG phenotypes for the ALL dataset.

From: Improving detection of differentially expressed gene sets by applying cluster enrichment analysis to Gene Ontology

No GO ID Term Ranka p-value
1 GO:0043122 regulation of I-kappaB kinase/NF-kappaB ... 3 3.7e-06
  GO:0043123 positive regulation of I-kappaB kinase/N... -  
  GO:0043124 negative regulation of I-kappaB kinase/N... -  
2 GO:0000084 S phase of mitotic cell cycle - 2.9e-05
  GO:0000115 S-phase-specific transcription in mitoti... -  
3 GO:0032715 negative regulation of interleukin-6 pro... - 0.012
  GO:0032755 positive regulation of interleukin-6 pro... -  
  GO:0042226 interleukin-6 biosynthetic process -  
  GO:0045408 regulation of interleukin-6 biosynthetic... -  
  GO:0045410 positive regulation of interleukin-6 bio... -  
4 GO:0032088 inhibition of NF-kappaB transcription fa... - 0.027
  GO:0043392 negative regulation of DNA binding -  
  GO:0043433 negative regulation of transcription fac... -  
5 GO:0007257 activation of JNK activity - 0.045
  GO:0043507 positive regulation of JNK activity -  
  1. a Refers to the rank on the list of top GO terms enriched by individual GO term analysis for FDR controlled at 5%. The dash (-) indicates that this GO term was not found on the list generated by individual GO term analysis.