Table 7 Classification: Regulation of DNA Repair
From: Identification of novel DNA repair proteins via primary sequence, secondary structure, and homology
Seq. Similarity | Pos/Neg (% Pos) | Method | AUC | TPR-0 | TPR-1% | TPR-5% |
|---|---|---|---|---|---|---|
| Â | Â | P | 0.97 | 57.02 | 92.98 | 94.74 |
| Â | Â | PS | 0.98 | 87.72 | 93.86 | 95.61 |
50% | 114/1716 (6%) | PF | 0.96 | 51.75 | 92.11 | 93.86 |
| Â | Â | BLAST | 0.96 | 85.96 | 94.74 | 94.74 |
| Â | Â | PH | 0.99 | 50.88 | 93.86 | 97.37 |
| Â | Â | PSH | 0.99 | 76.32 | 93.86 | 97.37 |
| Â | Â | P | 0.98 | 62.64 | 94.83 | 97.13 |
| Â | Â | PS | 0.99 | 90.80 | 95.40 | 97.70 |
90% | 174/4471 (4%) | PF | 0.97 | 52.30 | 93.68 | 94.83 |
| Â | Â | BLAST | 0.99 | 82.76 | 97.13 | 97.13 |
| Â | Â | PH | 0.99 | 62.07 | 97.13 | 98.28 |
| Â | Â | PSH | 0.99 | 83.33 | 95.98 | 97.70 |
| Â | Â | P | 0.99 | 69.70 | 97.35 | 98.48 |
| Â | Â | PS | 0.99 | 88.26 | 96.97 | 99.24 |
0% | 264/7083 (4%) | PF | 0.99 | 36.74 | 95.83 | 97.35 |
| Â | Â | BLAST | 0.99 | 21.97 | 98.48 | 98.48 |
| Â | Â | PH | 0.99 | 36.74 | 98.86 | 99.24 |
| Â | Â | PSH | 0.99 | 80.68 | 98.11 | 99.24 |