Table 1 Evaluation of the clusters identified by ASTRO using Gene Ontology data
From: Extracting biologically significant patterns from short time series gene expression data
ASTRO (OPSM) | ||||
|---|---|---|---|---|
Clusters | No. of genes | Top GO term | # of genes in category | p -value |
A1 | 70 | Cellular biosynthetic process | 41 (58.6%) | 7.0e-16 |
| Â | Â | Biosynthetic process | 42 (60.0%) | 2.5e-13 |
B1 | 86 | Translation | 55 (64.0%) | 1.5e-33 |
| Â | Â | Macromolecule biosynthetic process | 55 (64.0%) | 1.5e-27 |
C1 | 25 | Ribosome biogenesis and assembly | 14 (56.0%) | 9.8e-15 |
| Â | Â | Ribonucleoprotein complex biogenesis and assembly | 14 (56.0%) | 9.6e-10 |
D1 | 74 | Ribosome biogenesis and assembly | 44 (59.5%) | 2.6e-34 |
| Â | Â | Ribonucleoprotein complex biogenesis and assembly | 44 (59.9%) | 4.6e-31 |
E1* | 33 | Sulfur metabolic process | 06 (18.2%) | 9.0e-05 |
| Â | Â | Sulfur amino acid metabolic process | 04 (12.1%) | 2.4e-03 |
F1* | 26 | Amino acid transport | 04 (15.4%) | 1.4e-03 |
| Â | Â | Amine transport | 04 (15.4%) | 3.6e-03 |