Table 5 Comparison of M2 Cross-Validation and predictions of comparable algorithms for 25 training set genes.
CT | HMM2 SCORE | M2 Cross-Validation | NNPP2.2 | TSS-PREDICT | Footy |
|---|---|---|---|---|---|
CT046 | -1.6 | 1/1 | 0/4 | 0/2 | 0/0 |
CT062 | 4.0 | 1/2 | 0/0 | 1/1 | 1/1 |
CT080 | 0.5 | 1/2 | 1/4 | 0/2 | 0/0 |
CT091 | 1.3 | 1/3 | 1/1 | 1/1 | 0/0 |
CT098 | 3.7 | 1/1 | 0/1 | 1/2 | 1/1 |
CT111 | -1.0 | 1/1 | 1/3 | 0/2 | 1/1 |
CT286 | 1.2 | 1/1 | 1/2 | 1/1 | 1/1 |
CT322 | -2.1 | 0/0 | 0/0 | 0/2 | 0/0 |
CT323 | 1.6 | 1/1 | 1/3 | 1/1 | 1/1 |
CT377 | 5.3 | 1/2 | 1/3 | 1/1 | 0/0 |
CT394 | -1.5 | 1/1 | 1/2 | 1/1 | 0/0 |
CT439m | 1.8 | 1/1 | 0/3 | 0/0 | 1/1 |
CT442 | -0.9 | 1/2 | 1/1 | 1/1 | 0/0 |
CT444 | 3.2 | 2/5 | 2/5 | 1/2 | 0/0 |
CT518 | -4.2 | 1/1 | 0/0 | 1/1 | 0/0 |
CT557 | -3.4 | 1/1 | 0/1 | 1/1 | 0/0 |
CT559 | -2.7 | 1/1 | 1/1 | 0/2 | 1/1 |
CT576 | 0.6 | 1/2 | 1/3 | 1/2 | 0/0 |
CT596 | 0.5 | 1/1 | 0/1 | 0/2 | 1/1 |
CT674 | 4.0 | 1/2 | 1/2 | 0/0 | 0/0 |
CT701 | -3.3 | 1/1 | 1/2 | 0/2 | 0/0 |
CT708 | 2.6 | 1/1 | 1/2 | 1/1 | 1/1 |
CT743 | -3.8 | 0/0 | 0/2 | 1/5 | 0/0 |
CT752 | -3.5 | 0/0 | 1/1 | 0/2 | 1/1 |
CT863 | 4.0 | 1/1 | 1/1 | 1/1 | 0/0 |
Sensitivity | 23/26 (0.89) | 17/26 (0.65) | 15/26 (0.58) | 10/26 (0.39) | |
Precision | 23/34 (0.68) | 17/48 (0.35) | 15/38 (0.40) | 10/10 (1.0) |