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Table 4 Results for the P53 gene sets in the Wild-Type/P53 mutant data set.

From: Comparative study of gene set enrichment methods

   RS GLAPA GSEA
Pathway Size Rank P-value Rank P-value1 P-value2 Rank P-value
STRESS_P53_SPECIFIC_UP 17 2 0.000 3 0.004 0.000 2 0.000
P53GENES_ALL 30 4 0.000 9 0.013 0.000 8 0.000
P53PATHWAY 41 10 0.000 10 0.019 0.000 5 0.000
KANNAN_P53_UP 52 9 0.001 11 0.018 0.000 6 0.000
P53HYPOXIAPATHWAY 38 21 0.001 15 0.022 0.000 4 0.000
P53_BRCA1_UP 40 137 0.068 66 0.084 0.008 1 0.000
P53_SIGNALING 163 59 0.023 60 0.075 0.000 203 0.063
P21_P53_EARLY_DN 14 75 0.103 619 0.348 0.329 47 0.017
P21_P53_ANY_DN 46 470 0.294 1212 0.548 0.736 66 0.067
P21_P53_LATE_DN 11 661 0.357 1218 0.527 0.650 454 0.323
P21_P53_MIDDLE_DN 21 1381 0.744 1243 0.544 0.683 440 0.307
KANNAN_P53_DN 25 1478 0.893 1015 0.476 0.569 944 0.548