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Table 2 Comparison of five network features for the dK distribution models with that of the GDS1013 coexpression network with PCC cut-off threshold of 0.89, d = 1, 2, 3.

From: Usefulness and limitations of dK random graph models to predict interactions and functional homogeneity in biological networks under a pseudo-likelihood parameter estimation approach

Metric λ 1 λ n-1 d σ d r
Coexp 0.09 1.91 3.27 1.31 0.5
1k 0.31(0.068) 1.69(0.068) 2.61(0.0053) 0.67 -0.05(0.0052)
2k 0.12(0.038) 1.88(0.038) 2.78(0.0013) 0.83 0.20(0.0037)
3k 0.19(0.059) 1.81(0.059) 2.69(0.0074) 0.74 0.12(0.0042)
  1. Notations are the same as in Table 1.