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Table 2 Results of training and validation classification of alignment blocks at the 1% confidence interval

From: Accurate discrimination of conserved coding and non-coding regions through multiple indicators of evolutionary dynamics

 

Training

Validation

Long

2126

1427

Cod TP/total Cod

1139/1246 (91.42%)

768/844 (90.10%)

Cod FP/total NC

10/880 (1.14%)

8/583 (1.37%)

NC TP/total NC

632/880 (71.82%)

438/583 (76.13%)

NC FP/total Cod

13/1246 (1.04%)

5/844 (0.59%)

Indeterminate/total

332/2126 (15.62%)

208/1427 (14.58%)

Short

2059

1380

Cod TP/total Cod

481/650 (74.00%)

305/436 (70.00%)

Cod FP/total NC

14/1409 (0.99%)

7/944 (0.74%)

NC TP/total NC

757/1409 (53.72%)

498/944 (52.75%)

NC FP/total Cod

8/650 (1.23%)

8/436 (1.83%)

Indeterminate/total

799/2059 (38.81%)

562/1377 (40.72%)

Combined

4185

2807

Cod TP/total Cod

1639/1896 (86.54%)

1073/1280 (83.83%)

Cod FP/total NC

24/2289 (1.05%)

15/1527 (0.98%)

NC TP/total NC

1389/2289 (60.68%)

936/1527 (61.30%)

NC FP/total Cod

21/1896 (1.11%)

13/1280 (1.02%)

Indeterminate/total

1031/4185 (24.64%)

692/2807 (24.65%)