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Table 1 List of notations used

From: RRW: repeated random walks on genome-scale protein networks for local cluster discovery

Symbol

Definition

Symbol

Definition

G

Undirected, weighted graph

α

Random walk restart probability

V

Vertices in graph

λ

Early cutoff value

E

Edges in graph

k

Number of iteractions (maximum cluster size)

P

Transition matrix for graph

s i

Restart vector for a node (or set of nodes) i

C

Vector consisting of a cluster of nodes

x i

Random Walk stationary vector from a node (or set of nodes) i