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Figure 1 | BMC Bioinformatics

Figure 1

From: Epitopia: a web-server for predicting B-cell epitopes

Figure 1

Illustration of Epitopia's prediction for the 3D structure of the VEGF [PDB: 1BJ1, chain W]. (A) A sample of the immunogenicity and probability scores computed for each of the surface residues of the input structure. (B) The FirstGlance in Jmol interface presenting the color-coded immunogenicity scores projected onto the surface of the protein shown in spacefill. (C) Presentation of the VEGF structure, color-coded as in A, along with the backbones of the chains of its binding antibody [PDB: 1BJ1, chains L and H].

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