Figure 11
From: Using least median of squares for structural superposition of flexible proteins
Multiple level superposition for Topo II: 1bgw (red) and 1bjt (green). (a) Level 1 (Core% = 56.4%). (b) Level 2 (Core% = 22.1%). (c) Level 3 (Core% = 11.7%). (d) Level 4 (Core% = 5.1%). Note that our method can capture different rigid domains in multiple level superposition, where the superimposed rigid domains are highlighted in the selected regions with the solid line boundary.