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Table 1 TM topology predictors

From: MetaTM - a consensus method for transmembrane protein topology prediction

Method Version TM pred. SP pred. Homology
TopPred 1.0 Yes No No
PHDhtm 2.1 Yes No Yes
HMMTOP 2.1 Yes No Yes
TMHMM 2.0 Yes No No
PolyPhobius 1.0 Yes Yes Yes
Memsat 3.0 Yes Yes Yes
SignalP 3.0 No Yes No
  1. Features of the six TM topology predictors incorporated in MetaTM, plus the SP-only predictor SignalP.