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Table 5 Entire topology prediction results

From: MetaTM - a consensus method for transmembrane protein topology prediction

 

MT

PP

TH

HT

PH

MS

TP

TMsingleAndSP

97.2%

94.0%

75.5%

47.5%

79.1%

72.7%

7.1%

TMmultiAndSP

84.1%

81.0%

52.4%

57.1%

47.6%

65.1%

3.2%

TMsingleNoSP

81.0%

65.8%

68.8%

73.4%

69.6%

79.3%

53.6%

TMmultiNoSP

66.1%

63.7%

51.4%

65.7%

45.7%

67.4%

37.2%

GLBandSP

94.9%

93.4%

74.4%

37.5%

64.6%

69.7%

2.4%

GLBnoSP

97.0%

96.0%

98.8%

86.6%

71.6%

90.4%

49.5%

Average

86.7%

82.3%

70.2%

61.3%

63.0%

74.1%

25.5%

Average Rank

1.3

3.2

3.8

4.5

5.0

3.2

7.0

  1. The abbreviations are the same as described in Table 3. The prediction for globular proteins was counted as correct if no TM segment had been predicted, regardless of the N-terminal location prediction.