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Table 3 Samples of short-form knowledge base entries

From: BIRI: a new approach for automatically discovering and indexing available public bioinformatics resources from the literature

Resource Functionality Category Domain
CrossLink Exploration of relationships between RNA sequences Exploration RNA
FATCAT Server for structure comparison and structure similarity searching Comparison Protein
FATCAT Server for structure comparison and structure similarity searching Comparison Protein
MATRAS Protein 3D structure comparison Comparison Protein
MATRAS Accumulation structural employs progressive alignment algorithm 3D alignments useful tools for insights into protein 3D structures Alignment Protein
GenePublisher Analysis of DNA microarray data Analysis DNA
GenePublisher Analysis of DNA microarray data Analysis Microarray
  1. The table shows examples of the knowledge base contents according with the resources shown in Figure 3. After executing a query, this is the information provided by the BIRI Web Application. It includes resource names and links, functionalities, categories, and domains.