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Table 5 Binding site detection by grammars obtained for PS00307 pattern.

From: A stochastic context free grammar based framework for analysis of protein sequences

  Detection (Exact) Detection (50% coverage)
Accessibility 0.76 0.99
Ca 0.45 0.85
Mn 0.37 0.88
Combination 0.75 1.00
  1. Detection (Exact): the peak is expected to be exactly at the position of the pattern; Detection (50% coverage): the peak is expected to be no longer distance than 50% of the pattern length (here: 10)