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Table 6 Performance comparison of standard and NestedNT SCFGs

From: A stochastic context free grammar based framework for analysis of protein sequences

  Max. F1 (Rc|Pr = 1.0)
  PS00063 PS00307 MPI phosphatase Zinc finger
  Standard NestedNT Standard NestedNT Standard NestedNT Standard NestedNT
Acc 0.31 0.36 0.16 0.61 0.49 0.76 0.25 -
NAP 0.18 0.18 - - - - - -
Ca - - 0.30 0.44 - - - -
Mn - - 0.46 0.52 - - - -
SO4 - - - - 0.65 0.79 - -
Zn - - - - - - 0.78 0.81
Comb 0.38 0.53 0.72 0.91 0.75 0.89 0.61 -