Skip to main content

Table 6 Performance comparison of standard and NestedNT SCFGs

From: A stochastic context free grammar based framework for analysis of protein sequences

 

Max. F1 (Rc|Pr = 1.0)

 

PS00063

PS00307

MPI phosphatase

Zinc finger

 

Standard

NestedNT

Standard

NestedNT

Standard

NestedNT

Standard

NestedNT

Acc

0.31

0.36

0.16

0.61

0.49

0.76

0.25

-

NAP

0.18

0.18

-

-

-

-

-

-

Ca

-

-

0.30

0.44

-

-

-

-

Mn

-

-

0.46

0.52

-

-

-

-

SO4

-

-

-

-

0.65

0.79

-

-

Zn

-

-

-

-

-

-

0.78

0.81

Comb

0.38

0.53

0.72

0.91

0.75

0.89

0.61

-

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us