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Table 5 Misalignments of PLASTX and BLASTX

From: PLAST: parallel local alignment search tool for database comparison

E-value 10 1 10-1 10-2 10-3
BLASTX total 127124 104474 96559 91760 88127
PLASTX total 123425 101789 96051 90736 87085
Identical 113336 98660 93267 89285 85982
BLASTX include 1694 1240 972 794 655
PLASTX include 1317 823 591 398 268
BLASTX miss 8772 (7.5%) 2306 (2.2%) 2193 (2.2%) 1053 (1.0%) 835 (0.9%)
PLASTX miss 12094 (9.5%) 4574 (4.3%) 2701 (2.8%) 1681 (1.8%) 1490 (1.6%)
  1. Misalignments of PLASTX and BLASTX for SWPROT versus DNA-GB-1K for different E-values.