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Figure 4 | BMC Bioinformatics

Figure 4

From: Evaluating the impact of scoring parameters on the structure of intra-specific genetic variation using RawGeno, an R package for automating AFLP scoring

Figure 4

Comparison of genetic structure estimators. The statistics evaluate the consistency of two structure analyses, computed with the manual dataset and two automatically scored datasets assumed to be accurate according to the Ibin criterion (i.e. "RG_2" and "GM_2"). The estimations obtained with the three datasets are compared with pairwise scatterplots (RG versus Manual, GM versus Manual and RG versus GM) and linear regressions (displayed as a solid line). The R2, the slope and the intercept of the regression are indicated. A. to C. Inter-individual similarities (Jaccard similarity index). D. to F. Inter-population distances (FST).

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BMC Bioinformatics

ISSN: 1471-2105

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