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Table 4 Evaluation of prediction of dependent transcription factor binding sites using transcription factors involved in the regulation of human liver.

From: Transcription factor site dependencies in human, mouse and rat genomes

Promoter of human gene (Ensembl ID)

TP

TN

FP

FN

Specificity

Sensitivity

ENSG00000150526

6

23

46

1

0.33

0.857

ENSG00000017427

6

20

49

1

0.29

0.857

ENSG00000084674

6

23

46

1

0.33

0.857

ENSG00000115718

5

23

46

2

0.33

0.714

ENSG00000116833

6

28

41

1

0.41

0.857

ENSG00000126218

6

21

48

1

0.30

0.857

ENSG00000136872

6

20

49

1

0.29

0.857

ENSG00000163581

6

25

44

1

0.36

0.857

ENSG00000163631

6

21

48

1

0.30

0.857

ENSG00000167165

6

28

41

1

0.40

0.857

ENSG00000167910

6

27

42

1

0.39

0.857

ENSG00000171759

6

26

43

1

0.37

0.857

ENSG00000173531

6

23

46

1

0.33

0.857

ENSG00000180432

6

23

46

1

0.33

0.857

ENSG00000101076

6

22

47

1

0.32

0.857

ENSG00000163631

6

21

48

1

0.30

0.857

ENSG00000145321

6

23

46

1

0.33

0.857

ENSG00000169562

6

22

47

1

0.32

0.857

ENSG00000132437

6

21

48

1

0.30

0.857

ENSG00000105398

6

24

45

1

0.35

0.857

ENSG00000131482

6

25

44

1

0.36

0.857

ENSG00000198610

6

25

44

1

0.36

0.857

  1. TP-true positives, FP-false positives, TN-true negative, FN-false negative, sensitivity = TP/(TP+FN), specificity = TN/(TN+FP)
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BMC Bioinformatics

ISSN: 1471-2105

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