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Figure 3 | BMC Bioinformatics

Figure 3

From: BayesPI - a new model to study protein-DNA interactions: a case study of condition-specific protein binding parameters for Yeast transcription factors

Figure 3

Condition-specific binding parameters for four yeast TFs known for being activated by stress conditions. Y-axis are predicted TF binding parameters (e.g. minimum binding energy and chemical potential) by the BayesPI. Magenta line stands for minimal binding energy E BP (consensus) and blue line for chemical potential U BP . For estimating uncertainties in the predictions, error bars of binding parameters were computed by applying the BayesPI three times on each ChIP-chip dataset, 80 percent of randomly selected original dataset was included in every calculation.

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BMC Bioinformatics

ISSN: 1471-2105

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