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Table 5 Analysis of SSE content rules over different subsets

From: Prediction of protein-protein interaction types using association rule based classification

Subset

#. of rules

Fraction(%)

c o n f 1 a MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaem4yamMaem4Ba8MaemOBa4MaemOzay2aa0baaSqaaiabigdaXaqaaiabdggaHbaaaaa@33AD@

#. of SSE rules

c o n f 2 b MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaem4yamMaem4Ba8MaemOBa4MaemOzay2aa0baaSqaaiabikdaYaqaaiabdkgaIbaaaaa@33B1@

SSE c

22

14.01%

0.533

-

-

TOPK d

31

19.75%

0.642

13

0.661

Unique e

58

36.94%

0.536

16

0.622

  1. acon f1: Average confidence of a rule subset;
  2. bcon f2: Average confidence of SSE content rules in a rule subset;
  3. cSSE: Association rules encoding SSE content;
  4. dTOPK: Top K rules covering top 20% in confidence;
  5. eUnique: Unique rules.
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BMC Bioinformatics

ISSN: 1471-2105

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