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Figure 7 | BMC Bioinformatics

Figure 7

From: Predicting sulfotyrosine sites using the random forest algorithm with significantly improved prediction accuracy

Figure 7

The conditional density functions drawn at N 1 and C 1 residues, respectively. The horizontal axes represent the Cornette scale values while the vertical axes represent the density values. The density functions are estimated using the kernel approach using the R stats package with default parameter setting. The graph shows that the density functions drawn at N1 demonstrate a larger separation between two classes while this difference is getting smaller for the residue C1, which does not have a high rank value from RF models. Note that negative means unconfirmed sulfotyrosine whilst positive means experimentally verified sulfotyrosine.

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