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Table 5 Number of differentially expressed probes between Tpl2-/- knockout and wild-type samples at 180 mins at a 5% false discovery rate when probe filtering is applied or not applied

From: Illumina WG-6 BeadChip strips should be normalized separately

Normalization

Without filtering

With filtering

  

Before normalization

After normalization

Array-level

47

62

60

Strip-level

89

105

106