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Table 2 Summary of methods and abbreviations.

From: Comparison of eukaryotic phylogenetic profiling approaches using species tree aware methods

Abbrev. Methodology Statistic
DPCP Presence-absence profiling using Dollo parsimony compressed profiles. Hypergeometric p-value
WRUNS Presence-absence profiling using Weighted hypergeometric and runs test Weighted hypergeometric score
GSHGTPars Parsimony reconstructed ancestral group sizes Hypergeometric p-value
GSCORPars Parsimony reconstructed ancestral group sizes Kendall-τ p-value
GSHGTGeneT Gene-tree reconstructed ancestral group sizes Hypergeometric p-value
GSCORGeneT Gene-tree reconstructed ancestral group sizes Kendall-τ p-value