Table 5 Sensitivity of Information Content adjusted p-values at 5% type I error using kernel fit.
From: Comparison of eukaryotic phylogenetic profiling approaches using species tree aware methods
Positive pair set | DPCP | WRUNS | GSHGTPars | GSCORPars | GSHGTGeneT | GSCORGeneT |
|---|---|---|---|---|---|---|
OrthoMCL | ||||||
TPCoPW | 16.4% | 13.6% | 0.2% | 2.2% | 5.7% | 6.5% |
TPPPI | 17.0% | 14.5% | 1.0% | 0.9% | 14.4% | 14.8% |
InterPro | ||||||
TPCoPW | 10.9% | 10.7% | 2.0% | 5.3% | 8.8% | 11.1% |
TPPPI | 3.3% | 3.9% | 4.4% | 10.4% | 14.3% | 16.8% |