Table 2 Size of the data sets
From: Regularized estimation of large-scale gene association networks using graphical Gaussian models
data set | arrays | genes | time series | repeated measurements | size of full graph | Availability |
|---|---|---|---|---|---|---|
ecoli1 | 23 | 100 | yes | no | 4 950 | R package plsgenomics[55] |
ecoli2 | 9 | 102 | yes | no | 5 151 | R package GeneNet[38] |
ara | 22 | 800 | yes | no | 319 600 | R package GeneNet |
t.cell10 | 100 | 58 | yes | yes | 1 653 | R package longitudinal[56] |
t.cell34 | 340 | 58 | yes | yes | 1 653 | R package longitudinal |
west | 49 | 3883 | no | no | 7 536 903 |