From: DISPARE: DIScriminative PAttern REfinement for Position Weight Matrices
Different sets of matrix wm | |||
---|---|---|---|
Set A | 1000 sequences (500 test + 500 training) and 2 × 500 background sequences | 1000 nucleotides | 60% GC |
Set B | 1000 sequences (500 test + 500 training) and 2 × 500 background sequences | 2000 nucleotides | 60% GC |
Set C | 400 sequences (200 test + 200 training) and 2 × 200 background sequences | 1000 nucleotides | 50% GC |
Set D | 400 sequences (200 test + 200 training) and 2 × 200 background sequences | 10000 nucleotides | 60% GC |
Set E | 400 sequences (200 test + 200 training) and 2 × 200 background sequences | 10000 nucleotides | 50% GC |