From: Uncovering transcriptional interactions via an adaptive fuzzy logic approach
TF | # TIs | Over-representation analysis | Gene set enrichment analysis | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
 |  | AdaFuzzy* | cPSMF | GRAM | COGRIM | ReMoDis | AdaFuzzy* | cPSMF | GRAM | COGRIM | ReMoDis |
ABF1 | 598 | 5.48 | 5.93 | 6.12 | 5.74 | 4.55 | 4.57 | 4.56 | 4.60 | 5.05 | 3.76 |
ACE2 | 125 | 4.32 | 4.43 | 1.60 | 3.59 | 4.47 | 3.47 | 2.06 | 5.23 | 3.43 | 1.53 |
FKH1 | 164 | 4.53 | 4.62 | 4.79 | 1.76 | 4.05 | 4.26 | 4.51 | 1.91 | 2.99 | 2.04 |
FKH2 | 227 | 6.53 | 6.10 | 1.28 | 5.82 | 6.09 | 3.96 | 2.86 | 3.60 | 4.02 | 2.41 |
GCN4 | 306 | 6.96 | 7.23 | 6.64 | 7.40 | 7.61 | 4.36 | 5.71 | 2.09 | 1.48 | 4.72 |
LEU3 | 267 | 6.95 | 7.74 | 7.29 | 6.44 | 5.20 | 2.19 | 2.70 | 1.32 | 1.05 | 1.83 |
MBP1 | 315 | 6.48 | 6.08 | 6.15 | 4.93 | 6.17 | 4.78 | 4.17 | 4.21 | 4.91 | 3.40 |
MCM1 | 378 | 6.81 | 6.13 | 6.87 | 5.97 | 6.74 | 3.36 | 2.71 | 1.19 | 2.93 | 1.40 |
NDD1 | 60 | 4.33 | 1.64 | 1.82 | 1.66 | 4.49 | 3.09 | 2.67 | 2.40 | 3.09 | 3.47 |
RAP1 | 993 | 9.05 | 8.39 | 7.37 | 8.92 | 6.60 | 5.45 | 6.49 | 0.85 | 2.17 | 2.04 |
REB1 | 216 | 5.30 | 5.52 | 5.03 | 5.53 | 5.10 | 5.12 | 4.13 | 5.09 | 4.92 | 3.46 |
STB1 | 143 | 5.51 | 4.72 | 4.43 | 3.91 | 6.51 | 4.92 | 2.11 | 0.50 | 2.89 | 5.09 |
SWI4 | 346 | 6.73 | 7.06 | 5.61 | 5.76 | 6.42 | 4.52 | 5.22 | 4.25 | 4.73 | 1.56 |
SWI5 | 255 | 5.36 | 4.41 | 2.36 | 5.70 | 4.78 | 5.51 | 6.01 | 5.79 | 5.54 | 0.94 |
SWI6 | 237 | 5.93 | 5.66 | 4.58 | 4.79 | 4.90 | 3.64 | 2.81 | 4.08 | 4.23 | 4.23 |
HSF1 | 335 | 5.61 | 6.53 | 4.42 | 4.40 | 4.38 | 3.74 | 3.47 | 1.64 | 2.92 | 3.52 |
MSN4 | 310 | 5.93 | 6.31 | 5.51 | 5.67 | 5.72 | 4.01 | 2.77 | 0.86 | 4.58 | 1.93 |
SKN7 | 403 | 5.78 | 5.86 | 6.75 | 4.55 | 2.91 | 2.57 | 1.29 | 2.88 | 1.27 | 0.85 |
YAP1 | 1246 | 6.46 | 6.08 | 5.69 | 6.64 | 5.92 | 3.03 | 3.10 | 2.62 | 2.81 | 1.90 |
Averaged | 6.00 | 5.81 | 4.96 | 5.22 | 5.40 | 4.03 | 3.65 | 2.90 | 3.42 | 2.64 |